Here is a list of all class members with links to the classes they belong to:
- r -
- r
: RDKit::DrawColour
- r0
: ForceFields::MMFF::MMFFBond
, ForceFields::MMFF::MMFFCovRadPauEle
, ForceFields::UFF::UFFBond
- r1
: ForceFields::UFF::AtomicParams
- R_ij_star
: ForceFields::MMFF::MMFFVdWRijstarEps
- R_ij_starUnscaled
: ForceFields::MMFF::MMFFVdWRijstarEps
- R_star
: ForceFields::MMFF::MMFFVdW
- Radical
: RDKit::StructureCheck::AugmentedAtom
, RDKit::StructureCheck::Ligand
- randNegEig
: RDKit::DGeomHelpers::EmbedParameters
- RandomSampleAllBBsStrategy()
: RDKit::RandomSampleAllBBsStrategy
- randomSampleFlipsAndPermutations()
: RDDepict::EmbeddedFrag
- RandomSampleStrategy()
: RDKit::RandomSampleStrategy
- randomSeed
: RDKit::DGeomHelpers::EmbedParameters
, RDKit::MolEnumerator::MolEnumeratorParams
- range()
: RDKit::MolDraw2D
- RangeQuery()
: Queries::RangeQuery< MatchFuncArgType, DataFuncArgType, needsConversion >
- Rb0()
: RDKit::atomicData
- RCore()
: RDKit::RCore
- Rcov()
: RDKit::atomicData
- RDAny()
: RDKit::RDAny
- rdbase
: RDKit::MolStandardize::CleanupParameters
- RDKitFPArguments()
: RDKit::RDKitFP::RDKitFPArguments< OutputType >
- RDKitFPAtomEnv()
: RDKit::RDKitFP::RDKitFPAtomEnv< OutputType >
- rdLogger()
: boost::logging::rdLogger
- RDProps()
: RDKit::RDProps
- RDValue()
: RDKit::RDValue
- reaction_smarts
: RDKit::Deprotect::DeprotectData
- ReactionFingerprintParams()
: RDKit::ReactionFingerprintParams
- reactionFromPickle()
: RDKit::ReactionPickler
- ReactionPickler
: RDKit::ChemicalReaction
- ReactionPicklerException()
: RDKit::ReactionPicklerException
- read()
: RDKit::CustomPropHandler
, RDKit::DataStructsExplicitBitVecPropHandler
- readMolProps()
: RDKit::ForwardSDMolSupplier
- reagentMaxMatchCount
: RDKit::EnumerationParams
- recalculateScore()
: RDKit::RGroupDecompositionChromosome
- RECHARGED
: RDKit::StructureCheck::StructChecker
- rechargeMolecule()
: RDKit::StructureCheck::ChargeFix
- rect_
: RDKit::AnnotationType
- rect_corr_
: RDKit::StringRect
- recursionPossible
: RDKit::SubstructMatchParameters
- recursiveCompare()
: RDKit::CIPLabeler::SequenceRule
- RecursiveStructureQuery()
: RDKit::RecursiveStructureQuery
- ref()
: RDKit::CIPLabeler::PairList
- refConf
: RDKit::MolAlign::O3AFuncData
- reference
: RDKit::MolStandardize::TautomerEnumeratorResult::const_iterator
- Reflect()
: RDDepict::EmbeddedAtom
, RDDepict::EmbeddedFrag
, RDGeom::Transform3D
- refProp
: RDKit::MolAlign::O3AFuncData
- registerProperty()
: RDKit::Descriptors::Properties
- registry
: RDKit::Descriptors::Properties
- reionize()
: RDKit::MolStandardize::Reionizer
- Reionizer()
: RDKit::MolStandardize::Reionizer
- relabel()
: RDKit::RGroupDecompData
- relabelCore()
: RDKit::RGroupDecompData
- relabelRGroup()
: RDKit::RGroupDecompData
- RemainingAtoms
: RDKit::FMCS::Seed
- RemainingBonds
: RDKit::FMCS::Seed
- RemainingSizeRejected
: RDKit::FMCS::ExecStatistics
- remove()
: RDKit::MolStandardize::FragmentRemover
- removeAgentTemplates()
: RDKit::ChemicalReaction
- removeAllHydrogenRGroups
: RDKit::RGroupDecompositionParameters
- removeAllHydrogenRGroupsAndLabels
: RDKit::RGroupDecompositionParameters
- removeAndTrackIsotopes
: RDKit::MolOps::RemoveHsParameters
- removeAtom()
: RDKit::RWMol
- removeBond()
: RDKit::RWMol
- removeCollisionsBondFlip()
: RDDepict::EmbeddedFrag
- removeCollisionsOpenAngles()
: RDDepict::EmbeddedFrag
- removeCollisionsShortenBonds()
: RDDepict::EmbeddedFrag
- removeConformer()
: RDKit::ROMol
- removeDefiningBondStereo
: RDKit::MolOps::RemoveHsParameters
- removeDegreeZero
: RDKit::MolOps::RemoveHsParameters
- removeDummyNeighbors
: RDKit::MolOps::RemoveHsParameters
- removeEntry()
: RDKit::FilterCatalog
- removeHigherDegrees
: RDKit::MolOps::RemoveHsParameters
- removeHs
: RDKit::GeneralMolSupplier::SupplierOptions
, RDKit::SmilesParserParams
- removeHydrides
: RDKit::MolOps::RemoveHsParameters
- removeHydrogensPostMatch
: RDKit::RGroupDecompositionParameters
- removeInSGroups
: RDKit::MolOps::RemoveHsParameters
- removeInternalEdges()
: RDKit::CIPLabeler::Configuration
- removeIsotopes
: RDKit::MolOps::RemoveHsParameters
- removeMapped
: RDKit::MolOps::RemoveHsParameters
- RemoveMinorFragments
: RDKit::StructureCheck::StructCheckerOptions
- removeNonimplicit
: RDKit::MolOps::RemoveHsParameters
- removeOnlyHNeighbors
: RDKit::MolOps::RemoveHsParameters
- removeRgroupData()
: RDKit::VarianceDataForLabel
- removeSnapshot()
: RDKit::Trajectory
- removeUnmappedProductTemplates()
: RDKit::ChemicalReaction
- removeUnmappedReactantTemplates()
: RDKit::ChemicalReaction
- removeVarianceData()
: RDKit::FingerprintVarianceScoreData
- removeWithQuery
: RDKit::MolOps::RemoveHsParameters
- removeWithWedgedBond
: RDKit::MolOps::RemoveHsParameters
- RepeatUnitOp()
: RDKit::MolEnumerator::RepeatUnitOp
- replaceAtom()
: RDKit::RWMol
- replaceAtomBookmark()
: RDKit::ROMol
- replaceBond()
: RDKit::RWMol
- replaceCoreAtomsWithMolMatches()
: RDKit::RCore
- replacements
: RDKit::SmartsParserParams
, RDKit::SmilesParserParams
- reserve()
: RDKit::Conformer
- reserved_tag
: RDKit::RDValue
- reset()
: RDFeatures::ImplicitFeature< FAMILYMARKER, TYPEMARKER, LOCTYPE >
, RDKit::Dict
, RDKit::EnumerateLibraryBase
, RDKit::ForwardSDMolSupplier
, RDKit::MolSupplier
, RDKit::PDBMolSupplier
, RDKit::ResonanceMolSupplier
, RDKit::RingInfo
, RDKit::SDMolSupplier
, RDKit::SmilesMolSupplier
, RDKit::TDTMolSupplier
- resetHolders()
: RDKit::SubstructLibrary
- resetState()
: RDKit::EnumerateLibraryBase
- resize()
: RDKit::Conformer
, RDKit::FMCS::TArray2D< T >
- ResonanceFlags
: RDKit::ResonanceMolSupplier
- ResonanceMolSupplier()
: RDKit::ResonanceMolSupplier
, RDKit::ResonanceMolSupplierCallback
- ResonanceMolSupplierCallback()
: RDKit::ResonanceMolSupplierCallback
- ResultTuple
: RDKit::MultiFPBReader
- revistedNeighbors
: RDKit::Canon::canon_atom
- RGroupData()
: RDKit::RGroupData
- RGroupDecompData()
: RDKit::RGroupDecompData
- RGroupDecomposition()
: RDKit::RGroupDecomposition
- RGroupDecompositionChromosome()
: RDKit::RGroupDecompositionChromosome
- RGroupDecompositionParameters()
: RDKit::RGroupDecompositionParameters
- RGroupDecompositionProcessResult()
: RDKit::RGroupDecompositionProcessResult
- RGroupGa()
: RDKit::RGroupGa
- rgroupLabelling
: RDKit::RGroupDecompositionParameters
- RGroupMatch()
: RDKit::RGroupMatch
- rgroups
: RDKit::RGroupMatch
- rGroupScorer
: RDKit::GaResult
, RDKit::RGroupDecompData
- RGroupScorer()
: RDKit::RGroupScorer
- RING
: RDDepict::EmbeddedAtom
- RING_DUPLICATE
: RDKit::CIPLabeler::Node
- RingInfo()
: RDKit::RingInfo
- RingMatchesRingOnly
: RDKit::MCSAtomCompareParameters
, RDKit::MCSBondCompareParameters
- RingMatchTableSet()
: RDKit::FMCS::RingMatchTableSet
- rollbackBatchEdit()
: RDKit::RWMol
- ROMol
: RDKit::Atom
, RDKit::Bond
, RDKit::Conformer
, RDKit::ROMol
- rootedAtAtom
: RDKit::SmilesWriteParams
- rotate
: RDKit::MolDrawOptions
- rotate90()
: RDGeom::Point2D
- RotatePatterns
: RDKit::StructureCheck::StructCheckerOptions
- rotDir
: RDDepict::EmbeddedAtom
- Rule1a()
: RDKit::CIPLabeler::Rule1a
- Rule1b()
: RDKit::CIPLabeler::Rule1b
- Rule2()
: RDKit::CIPLabeler::Rule2
- Rule3()
: RDKit::CIPLabeler::Rule3
- Rule4a()
: RDKit::CIPLabeler::Rule4a
- Rule4b()
: RDKit::CIPLabeler::Rule4b
- Rule4c()
: RDKit::CIPLabeler::Rule4c
- Rule5()
: RDKit::CIPLabeler::Rule5
- Rule5New()
: RDKit::CIPLabeler::Rule5New
- Rule6()
: RDKit::CIPLabeler::Rule6
- Rules()
: RDKit::CIPLabeler::Rules
- run()
: RDKit::MolStandardize::FragmentValidation
, RDKit::MolStandardize::IsotopeValidation
, RDKit::MolStandardize::MolVSValidations
, RDKit::MolStandardize::NeutralValidation
, RDKit::MolStandardize::NoAtomValidation
, RDKit::RGroupGa
- runBatch()
: RDKit::RGroupGa
- runReactant()
: RDKit::ChemicalReaction
- runReactants()
: RDKit::ChemicalReaction
- Rvdw()
: RDKit::atomicData
- RWMol
: RDKit::Atom
, RDKit::Bond
, RDKit::ROMol
, RDKit::RWMol
- rxn
: RDKit::Deprotect::DeprotectData
- RxnSanitizeException()
: RDKit::RxnSanitizeException